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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954447.1_cds_XP_016493309.1_83432
CDS Infomation

[gene=LOC107812673] [db_xref=GeneID:107812673] [protein=E3 ubiquitin-protein ligase SGR9, amyloplastic-like] [protein_id=XP_016493309.1] [location=complement(join(10224..10546,10910..11052,11635..12023))] [gbkey=CDS]
Sequence

ATGAAAGATCAAAGACCCTTAGAATCCATAATCATGTCTGCACTTTCAACCTTTACTCCT
CCTCAACTCTCCGATCTAACACTTTACTTCTCCGCCCTCTACCACCGCCATCACCGCCGT
ATTTTCTCTCTACTCTCTTCTCCCACCCTCTTTTCCCTCACCTTACACCACCTCCACTCT
CTCTCCCTACACCACAAGTCTCTCCTCATAGCCAAACACCTGTTATTTAAACTTGCAATA
TTCACTCATTTCATGCACAATAACACAATCTTGCCACCACCCTCCACCGCCTCTATGAAA
CTCCGCGATTTAGACGCCGTTCTCCTCCTCCTACTACTCTGTGAACTCCGCCAACATGAT
CCAGAAGCACTCGATCTCCCTCCATCCAGGTGGCGCCTTGTTCTTTGTCAATACATAGCC
AAAGACGCGCTAAAACTTTCTAGCATTAGGGGCTCTAACAGAGAAGTCATAATGAAGTTC
ATTGAGATGGTGGCAAAATGCAAGAACTTTATCAATGCCATGAATGATACAGATGGTAAT
GGAGGAAAAGATAGGAAGGAAGTGGCGACGTCAGTGGCGATAGTGGTGGCGCTACCGTCA
GTGGAAGTGAGTGGCGGCCGAGGGAGGGAGTGTGTTATATGCAAAGAAGAGATGAAAGAA
GAAAGAGATGTTTGTAAATTGCCATGTCATCATTTGTTTCATTGGATATGTGTTTTGCCT
TGGTTGAAAACGAGGAACACATGTCCATGTTGCCGGTTTCAGTTACCGTCCGATGATGTT
TTCGCCGAAATCCGACGGTTGTGGGAGATTGTGGTCAAGACGAGTGATAGTGCAAAGTTT
GTAGGAGTTGTTTAG

Peptide Sequence

PEP ID

XP_016493309.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SGR9, amyloplastic-like [Nicotiana tabacum]
Sequence

MKDQRPLESIIMSALSTFTPPQLSDLTLYFSALYHRHHRRIFSLLSSPTLFSLTLHHLHS
LSLHHKSLLIAKHLLFKLAIFTHFMHNNTILPPPSTASMKLRDLDAVLLLLLLCELRQHD
PEALDLPPSRWRLVLCQYIAKDALKLSSIRGSNREVIMKFIEMVAKCKNFINAMNDTDGN
GGKDRKEVATSVAIVVALPSVEVSGGRGRECVICKEEMKEERDVCKLPCHHLFHWICVLP
WLKTRNTCPCCRFQLPSDDVFAEIRRLWEIVVKTSDSAKFVGVV

Transcript Sequence

Gene sequence data has not been registered.